Structural Basis for Glutamate Racemase Inhibition
2OHV
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Isomerase
    Structure Weight: 29335.51
    Molecule: Glutamate Racemase
    Polymer: 1 Type: protein Length: 264
    Chains: A
    EC#: 5.1.1.3   
    Organism: Streptococcus pyogenes M1 GAS
    Gene Names: murI glr SPy_0361 M5005_Spy0303
    UniProtKB: Protein Feature View | Search PDB | Q9A1B7  
     
  •   Structure Validation Hide

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  •   Related PDB Entries Hide
    Identifier Details
    1B73   Glutamate Racemase from Aquifex Pyrophilus 
    1ZUW   Crystal structure of B.subtilis glutamate racemase with D-Glu 
    2OHG    
    2OHO    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    NHL
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    NHL C16 H17 N O4
    (4S)-4-(2-NAPHTHYLMETHYL)-D-GLUTAMIC ACID
    NHL:2OHV
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    NHL
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    NHL
    N/Ain BindingDB
    Ki: 16 nM - data from BindingMOAD  
    N/Ain PDBbind
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Kim, E.E.

    Deposition:   2007-01-10
    Release:   2007-09-25
    Last Modified (REVDAT):   2009-02-24
     
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
    N/A
    Resolution[Å]:   2.50
    R-Value: 0.226 (obs.)
    R-Free: 0.237
    Space Group: P 32 2 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 79.75 α = 90.00 
    b = 79.75 β = 90.00 
    c = 95.70 γ = 120.00