2NRE

Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA

Structural Biology Knowledgebase: 2NRE SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 4.0 Å
  • R-Value Free: 0.357
  • R-Value Work: 0.259

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2NRE

Classification: ISOMERASE / RNA

Total Structure Weight: 58614.89


Macromolecule Entities
Molecule Chains Length Organism Details
tRNA pseudouridine synthase A A 270 Escherichia coli EC#: 5.4.99.12 IUBMB
Gene Name(s): truA asuC hisT leuK b2318 JW2315
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
leucyl tRNA F 87 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
K
Query on K

F POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 4.0 Å
  • R-Value Free: 0.357
  • R-Value Work: 0.259
  • Space Group: P 32 2 1

Unit Cell:

Length (Å) Angle (°)
a = 80.36 α = 90.00
b = 80.36 β = 90.00
c = 205.37 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-11-01
  • Released Date: 2007-05-15
  • Deposition author(s): Hur, S., Stroud, R.M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4