2JKK

FOCAL ADHESION KINASE CATALYTIC DOMAIN IN COMPLEX WITH BIS-ANILINO PYRIMIDINE INHIBITOR

Structural Biology Knowledgebase: 2JKK SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.179

Literature

Macromolecules
Sequence Display for 2JKK

Classification: TRANSFERASE

Total Structure Weight: 32297.00

Macromolecule Entities
Molecule Chains Length Organism Details
FOCAL ADHESION KINASE 1 A 276 Gallus gallus EC#: 2.7.10.2 IUBMB
Fragment: KINASE DOMAIN, RESIDUES 411-686
Gene Name(s): PTK2 Gene View FAK FAK1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BI9
Query on BI9

A 2-({5-CHLORO-2-[(2-METHOXY-4-MORPHOLIN-4- YLPHENYL)AMINO]PYRIMIDIN-4-YL}AMINO)-N-METHYLBENZAMIDE
C23 H25 Cl N6 O3
UYJNQQDJUOUFQJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
BI9 IC50: 5.5 - 7 nM (98) BindingDB

IC50: 6.24 nM  BindingMOAD
IC50: 6.24 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.179
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 44.13 α = 90.00
b = 45.15 β = 94.70
c = 67.46 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-08-28
  • Released Date: 2008-09-09
  • Deposition author(s): Lietha, D., Eck, M.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: Compliance with PDBx exchange dictionary V4
  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor