2JEP

NATIVE FAMILY 5 XYLOGLUCANASE FROM PAENIBACILLUS PABULI

Structural Biology Knowledgebase: 2JEP SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.144
  • R-Value Work: 0.115

Literature

Macromolecules
Sequence Display for 2JEP

Classification: HYDROLASE

Total Structure Weight: 88206.99

Macromolecule Entities
Molecule Chains Length Organism Details
XYLOGLUCANASE A, B 395 Paenibacillus pabuli EC#: 3.2.1.151 IUBMB
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EDO
Query on EDO

A, B 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A, B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.144
  • R-Value Work: 0.115
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 84.42 α = 90.00
b = 89.57 β = 90.00
c = 90.40 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-01-18
  • Released Date: 2007-03-20
  • Deposition author(s): Gloster, T.M., Ibatullin, F.M., Macauley, K., Eklof, J.M., Roberts, S., Turkenburg, J.P., Bjornvad, M.E., Jorgensen, P.L., Danielsen, S., Johansen, K., Borchert, T.V., Wilson, K.S., Brumer, H., Davies, G.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4