2HS8

Crystal structure of the Y364F mutant of 12-oxophytodienoate reductase 3 from tomato


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.275
  • R-Value Work: 0.226

Literature

Macromolecules
Sequence Display for 2HS8

Classification: oxidoreductase

Total Structure Weight: 89683.99

Macromolecule Entities
Molecule Chains Length Organism Details
12-oxophytodienoate reductase 3 A, B 402 Solanum lycopersicum EC#: 1.3.1.42 IUBMB
Mutation: Y364F
Gene Name(s): OPR3
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FMN
Query on FMN

A, B FLAVIN MONONUCLEOTIDE
RIBOFLAVIN MONOPHOSPHATE (Synonym)
C17 H21 N4 O9 P
FVTCRASFADXXNN-SCRDCRAPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.275
  • R-Value Work: 0.226
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 49.17 α = 90.00
b = 93.39 β = 97.67
c = 89.45 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-07-21
  • Released Date: 2006-09-12
  • Deposition author(s): Breithaupt, C., Clausen, T., Huber, R.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4