2HCH

N-Domain Of Grp94 In Complex With the Novel Ligand N-(2-amino)ethyl Carboxyamido Adenosine


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.220

Literature

Macromolecules
Sequence Display for 2HCH

Classification: CHAPERONE

Total Structure Weight: 54884.05

Macromolecule Entities
Molecule Chains Length Organism Details
Endoplasmin A, B 236 Canis lupus Fragment: N-terminal Domain of GRP94 Residues (69-337)
Gene Name(s): HSP90B1 Gene View GRP94 TRA1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
N5A
Query on N5A

A, B 5'-N-[(2-AMINO)ETHYL CARBOXAMIDO] ADENOSINE
3S, (Synonym)
C12 H17 N7 O4
XZUQLQNOMFGRFJ-FLNNQWSLSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
1PE
Query on 1PE

B PENTAETHYLENE GLYCOL
PEG400 (Synonym)
C10 H22 O6
JLFNLZLINWHATN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PG4
Query on PG4

A, B TETRAETHYLENE GLYCOL
C8 H18 O5
UWHCKJMYHZGTIT-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.220
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 65.66 α = 90.00
b = 84.77 β = 90.00
c = 94.92 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-06-16
  • Released Date: 2007-05-01
  • Deposition author(s): Immormino, R.M., Gewirth, D.T.

Revision History

  • Version 1_0: 2007-05-01

    Type: Initial release

  • Version 1_1: 2008-05-01

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2017-08-02

    Type: Source and taxonomy