2H8M

N-Domain Of Grp94 In Complex With the 2-Iodo-NECA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.241
  • R-Value Work: 0.213

Literature

Macromolecules
Sequence Display for 2H8M

Classification: CHAPERONE

Total Structure Weight: 56120.99

Macromolecule Entities
Molecule Chains Length Organism Details
Endoplasmin A, B 236 Canis lupus Fragment: N-terminal Domain of GRP94 Residues (69-337)
Gene Name(s): HSP90B1 Gene View GRP94 TRA1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NEI
Query on NEI

A, B (2S,3S,4R,5R)-5-(6-AMINO-2-IODO-9H-PURIN- 9-YL)-N-ETHYL-3,4-DIHYDROXYTETRAHYDROFURAN- 2-CARBOXAMIDE
C12 H15 I N6 O4
YEBHQRSEUJCFMN-QMWPFBOUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
1PE
Query on 1PE

B PENTAETHYLENE GLYCOL
PEG400 (Synonym)
C10 H22 O6
JLFNLZLINWHATN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PG4
Query on PG4

A, B TETRAETHYLENE GLYCOL
C8 H18 O5
UWHCKJMYHZGTIT-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.241
  • R-Value Work: 0.213
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 65.32 α = 90.00
b = 84.50 β = 90.00
c = 96.08 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-06-07
  • Released Date: 2007-04-24
  • Deposition author(s): Immormino, R.M., Gewirth, D.T.

Revision History

  • 2008-05-01
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance
  • 2017-08-02
    Type: Advisory, Source and taxonomy