2COL

Crystal structure analysis of CyaA/C-Cam with Pyrophosphate

Structural Biology Knowledgebase: 2COL SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.293
  • R-Value Work: 0.240

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2COL

Classification: LYASE / METAL BINDING PROTEIN

Total Structure Weight: 46607.45

Macromolecule Entities
Molecule Chains Length Organism Details
Bifunctional hemolysin-adenylate cyclase A 356 Bordetella pertussis EC#: 4.6.1.1 IUBMB
Gene Name(s): cya cyaA BP0760
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Calmodulin B 67 Xenopus laevis Gene Name(s): calm1 calm2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
POP
Query on POP

A PYROPHOSPHATE 2-
H2 O7 P2
XPPKVPWEQAFLFU-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.293
  • R-Value Work: 0.240
  • Space Group: P 41 21 2

Unit Cell:

Length (Å) Angle (°)
a = 79.61 α = 90.00
b = 79.61 β = 90.00
c = 139.46 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-05-18
  • Released Date: 2006-01-24
  • Deposition author(s): Guo, Q., Tang, W.J., Shen, Y.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4