2BJ6

CRYSTAL STRUCTURE OF A DECAMERIC HNA-RNA HYBRID

Structural Biology Knowledgebase: 2BJ6 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.217

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2BJ6

Classification: NUCLEIC ACID (HNA / RNA)

Total Structure Weight: 25929.37

Macromolecule Entities
Molecule Chains Length Organism Details
SYNTHETIC HNA A, B, C, D 10 Homo sapiens SYNTHETIC HEXITOL NUCLEIC ACID
5'-R(*GP*GP*CP*AP*UP*UP*AP*CP*GP*GP)-3' E, F, G, H 10 Homo sapiens SYNTHETIC RNA

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

B, C, E, G SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
JSmol
Modified Residues 4 Unique
ID Chains Type Formula 2D Diagram Parent
6HC
Query on 6HC
A, B, C, D DNA LINKING C10 H16 N3 O7 P DC
6HG
Query on 6HG
A, B, C, D DNA LINKING C11 H16 N5 O7 P DG
6HT
Query on 6HT
A, B, C, D DNA LINKING C11 H17 N2 O8 P DT
6HA
Query on 6HA
A, B, C, D DNA LINKING C11 H16 N5 O6 P DA

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.217
  • Space Group: P 41 21 2

Unit Cell:

Length (Å) Angle (°)
a = 113.91 α = 90.00
b = 113.91 β = 90.00
c = 55.37 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2005-01-30
  • Released Date: 2005-03-09
  • Deposition author(s): Maier, T., Przylas, I., Straeter, N., Herdewijn, P., Saenger, W.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4