NMR Ensemble

2A5R

Complex of tetra-(4-n-methylpyridyl) porphin with monomeric parallel-stranded DNA tetraplex, snap-back 3+1 3' G-tetrad, single-residue chain reversal loops, GAG triad in the context of GAAG diagonal loop, C-MYC promoter, NMR, 6 struct.

Structural Biology Knowledgebase: 2A5R SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 6
  • Conformers Submitted: 6
  • Selection Criteria: Structures with the Least Restraint Violations

wwPDB Validation report is not available for this NMR entry.


Literature

Macromolecules
Sequence Display for 2A5R

Classification: DNA

Total Structure Weight: 8380.83

Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*TP*GP*AP*GP*GP*GP*TP*GP*GP*IP*GP*AP*GP*GP*GP*TP*GP*GP*GP*GP*AP*AP*GP*G)-3' A 24 Homo sapiens

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
POH
Query on POH

A (1Z,4Z,9Z,15Z)-5,10,15,20-tetrakis(1-methylpyridin- 1-ium-4-yl)-21,23-dihydroporphyrin
TMPyP4 (Synonym)
C44 H38 N8
ABCGFHPGHXSVKI-LWQDQPMZSA-O
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 6
  • Conformers Submitted: 6
  • Selection Criteria: structures with the least restraint violations

Structure Validation

Validation report is not available for this NMR entry.



Entry History

Deposition Data

  • Deposited Date: 2005-06-30
  • Released Date: 2005-07-26
  • Deposition author(s): Phan, A.T., Kuryavyi, V.V., Gaw, H.Y., Patel, D.J.

Revision History

  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4