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Crystal Structure of a Member of YjgF Family from Sulfolobus Tokodaii (ST0811)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.188 
  • R-Value Work: 0.146 
  • R-Value Observed: 0.148 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Crystal structure of the YjgF/YER057c/UK114 family protein from the hyperthermophilic archaeon Sulfolobus tokodaii strain 7

Miyakawa, T.Lee, W.C.Hatano, K.Kato, Y.Sawano, Y.Miyazono, K.Nagata, K.Tanokura, M.

(2006) Proteins 62: 557-561


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Hypothetical UPF0076 protein ST0811
A, B
128Sulfurisphaera tokodaii str. 7Mutation(s): 0 
Gene Names: ST0811
UniProt
Find proteins for Q973T6 (Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7))
Explore Q973T6 
Go to UniProtKB:  Q973T6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ973T6
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.188 
  • R-Value Work: 0.146 
  • R-Value Observed: 0.148 
  • Space Group: H 3
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 54.98α = 90
b = 54.98β = 90
c = 221.557γ = 120
Software Package:
Software NamePurpose
REFMACrefinement
CrystalCleardata reduction
CCP4data scaling
MOLREPphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2006-02-07
    Type: Initial release
  • Version 1.1: 2008-04-30
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Derived calculations, Source and taxonomy, Version format compliance
  • Version 1.3: 2023-10-25
    Changes: Data collection, Database references, Refinement description