1X03

Crystal structure of endophilin BAR domain

Structural Biology Knowledgebase: 1X03 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.1 Å
  • R-Value Free: 0.264
  • R-Value Work: 0.236

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1X03

Classification: TRANSFERASE

Total Structure Weight: 29126.01

Macromolecule Entities
Molecule Chains Length Organism Details
SH3-containing GRB2-like protein 2 A 252 Homo sapiens EC#: 2.3.1 IUBMB
Fragment: endophilin BAR domain
Mutation: M1M, M36M, M48M, M51M, M70M, M74M, M97M, M121M, M201M, M207M
Gene Name(s): SH3GL2 Gene View CNSA2 SH3D2A
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.1 Å
  • R-Value Free: 0.264
  • R-Value Work: 0.236
  • Space Group: I 41
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 127.42 α = 90.00
b = 127.42 β = 90.00
c = 99.64 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-03-14
  • Released Date: 2006-05-02
  • Deposition author(s): Masuda, M., Takeda, S., Sone, M., Kamioka, Y., Mori, H., Mochizuki, N.

Revision History

  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4