1WL4

Human cytosolic acetoacetyl-CoA thiolase complexed with CoA

Structural Biology Knowledgebase: 1WL4 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.140
  • R-Value Work: 0.106

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1WL4

Classification: TRANSFERASE

Total Structure Weight: 42743.05

Macromolecule Entities
Molecule Chains Length Organism Details
acetyl-Coenzyme A acetyltransferase 2 A 397 Homo sapiens EC#: 2.3.1.9 IUBMB
Mutation: C92X, T169K, A262V
Gene Name(s): ACAT2 Gene View ACTL
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
COA
Query on COA

A COENZYME A
C21 H36 N7 O16 P3 S
RGJOEKWQDUBAIZ-IBOSZNHHSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
CSO
Query on CSO
A L-PEPTIDE LINKING C3 H7 N O3 S CYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.140
  • R-Value Work: 0.106
  • Space Group: I 2 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 57.86 α = 90.00
b = 109.83 β = 90.00
c = 155.69 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-06-20
  • Released Date: 2005-03-01
  • Deposition author(s): Kursula, P., Fukao, T., Kondo, N., Wierenga, R.K.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values