1WE5

Crystal Structure of Alpha-Xylosidase from Escherichia coli

Structural Biology Knowledgebase: 1WE5 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.247
  • R-Value Work: 0.206

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1WE5

Classification: HYDROLASE

Total Structure Weight: 535561.25

Macromolecule Entities
Molecule Chains Length Organism Details
Putative family 31 glucosidase yicI A, B, C..., D, E, FA, B, C, D, E, F 772 Escherichia coli EC#: 3.2.1.177 IUBMB
Mutation: M1M, M32M, M150M, M201M, M293M, M310M, M331M, M408M, M436M, M490M, M569M, M570M, M587M, M588M, M591M, M592M, M593M, M609M, M615M
Gene Name(s): yicI b3656 JW3631
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MES
Query on MES

A, B, C, D, E, F 2-(N-MORPHOLINO)-ETHANESULFONIC ACID
C6 H13 N O4 S
SXGZJKUKBWWHRA-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C, D, E, F L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.247
  • R-Value Work: 0.206
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 161.34 α = 90.00
b = 174.79 β = 90.00
c = 209.63 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-05-24
  • Released Date: 2005-02-15
  • Deposition author(s): Ose, T., Kitamura, M., Okuyama, M., Mori, H., Kimura, A., Watanabe, N., Yao, M., Tanaka, I.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4