1VYF

schistosoma mansoni fatty acid binding protein in complex with oleic acid


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.190

Literature

Macromolecules
Sequence Display for 1VYF

Classification: TRANSPORT PROTEIN

Total Structure Weight: 15293.38

Macromolecule Entities
Molecule Chains Length Organism Details
14 KDA FATTY ACID BINDING PROTEIN A 135 Schistosoma mansoni Details: 2 ADDITIONAL AMINO ACIDS AT THE N-TERMINUS
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
OLA
Query on OLA

A OLEIC ACID
C18 H34 O2
ZQPPMHVWECSIRJ-KTKRTIGZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
OLA N/A in BindingDB
Kd: 9 nM  BindingMOAD
Kd: 9 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.190
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 43.26 α = 90.00
b = 92.39 β = 90.00
c = 36.22 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-04-29
  • Released Date: 2004-09-23
  • Deposition author(s): Angelucci, F., Johnson, K.A., Baiocco, P., Miele, A.E., Bellelli, A.

Revision History

  • Version 1_0: 2004-09-23

    Type: Initial release

  • Version 1_1: 2011-05-08

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance