1T8Z

Atomic Structure of A Novel Tryptophan-Zipper Pentamer

Structural Biology Knowledgebase: 1T8Z SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Free: 0.277
  • R-Value Work: 0.216

Literature

Macromolecules
Sequence Display for 1T8Z

Classification: MEMBRANE PROTEIN

Total Structure Weight: 35145.03

Macromolecule Entities
Molecule Chains Length Organism Details
Major outer membrane lipoprotein A, B, C, D, E 53 Escherichia coli Mutation: I6W, L9W, V13W, L16W, V20W, L23W, V27W, M30W, V34W, A37W, A41W, A44W, L48W, M51W
Gene Name(s): lpp mlpA mulI b1677 JW1667
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
12P
Query on 12P

E DODECAETHYLENE GLYCOL
POLYETHYLENE GLYCOL PEG400 (Synonym)
C24 H50 O13
WRZXKWFJEFFURH-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

C, D SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Free: 0.277
  • R-Value Work: 0.216
  • Space Group: P 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 30.55 α = 97.37
b = 30.67 β = 91.94
c = 72.40 γ = 113.46

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-05-13
  • Released Date: 2004-11-23
  • Deposition author(s): Liu, J., Yong, W., Deng, Y., Kallenbach, N.R., Lu, M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4