1T4F

Structure of human MDM2 in complex with an optimized p53 peptide

Structural Biology Knowledgebase: 1T4F SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.231
  • R-Value Work: 0.197

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1T4F

Classification: LIGASE

Total Structure Weight: 13905.94

Macromolecule Entities
Molecule Chains Length Organism Details
Ubiquitin-protein ligase E3 Mdm2 M 110 Homo sapiens EC#: 6.3.2 IUBMB
Gene Name(s): MDM2 Gene View
optimized p53 peptide P 9 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

M SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.231
  • R-Value Work: 0.197
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 41.03 α = 90.00
b = 43.59 β = 90.00
c = 54.57 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-04-29
  • Released Date: 2005-02-08
  • Deposition author(s): Grasberger, B.L., Schubert, C., Koblish, H.K., Carver, T.E., Franks, C.F., Zhao, S.Y., Lu, T., LaFrance, L.V., Parks, D.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4