1SJE

HLA-DR1 complexed with a 16 residue HIV capsid peptide bound in a hairpin conformation

Structural Biology Knowledgebase: 1SJE SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.45 Å
  • R-Value Free: 0.223
  • R-Value Work: 0.196

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1SJE

Classification: IMMUNE SYSTEM

Total Structure Weight: 72361.74

Macromolecule Entities
Molecule Chains Length Organism Details
HLA class II histocompatibility antigen, DR alpha chain A 180 Homo sapiens Fragment: Extracelluar domain of HLA-DRA*0101
Gene Name(s): HLA-DRA Gene View HLA-DRA1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
HLA class II histocompatibility antigen, DRB1-1 beta chain B 190 Homo sapiens Fragment: Extracelluar domain of HLA-DRB*0101
Gene Name(s): HLA-DRB1 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
GAG polyprotein C 16 Human immunodeficiency virus 1 Fragment: 16 residue Peptide from HIV-1 gag capsid protein
Gene Name(s): gag
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Enterotoxin type C-3 D 239 Staphylococcus aureus Fragment: SEC3 variant 3B2
Mutation: K43S, L45F, A46K, H47W
Gene Name(s): entC3
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.45 Å
  • R-Value Free: 0.223
  • R-Value Work: 0.196
  • Space Group: H 3
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 172.75 α = 90.00
b = 172.75 β = 90.00
c = 121.40 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-03-03
  • Released Date: 2004-08-17
  • Deposition author(s): Zavala-Ruiz, Z., Strug, I., Walker, B.D., Norris, P.J., Stern, L.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4