1QZ5

Structure of rabbit actin in complex with kabiramide C


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Free: 0.187
  • R-Value Work: 0.169

Literature

Macromolecules
Sequence Display for 1QZ5

Classification: STRUCTURAL PROTEIN

Total Structure Weight: 43369.03

Macromolecule Entities
Molecule Chains Length Organism Details
Actin, alpha skeletal muscle A 375 Oryctolagus cuniculus Mutation: H73X
Gene Name(s): ACTA1 Gene View ACTA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
KAB
Query on KAB

A KABIRAMIDE C
C48 H75 N5 O14
XYKNXOJYKRVXBX-ZAUPHERQSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ATP
Query on ATP

A ADENOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O13 P3
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
HIC
Query on HIC
A L-PEPTIDE LINKING C7 H11 N3 O2 HIS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Free: 0.187
  • R-Value Work: 0.169
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 69.92 α = 90.00
b = 70.62 β = 90.00
c = 75.13 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-09-15
  • Released Date: 2003-11-11
  • Deposition author(s): Klenchin, V.A., Allingham, J.S., King, R., Tanaka, J., Marriott, G., Rayment, I.

Revision History

  • 2008-04-29
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance