1NFB

Ternary complex of the human type II Inosine Monophosphate Dedhydrogenase with 6Cl-IMP and NAD

Structural Biology Knowledgebase: 1NFB SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.274
  • R-Value Work: 0.229

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1NFB

Classification: OXIDOREDUCTASE

Total Structure Weight: 113812.98

Macromolecule Entities
Molecule Chains Length Organism Details
Inosine-5'-monophosphate dehydrogenase 2 A, B 514 Homo sapiens EC#: 1.1.1.205 IUBMB
Gene Name(s): IMPDH2 Gene View IMPD2

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAD
Query on NAD

A, B NICOTINAMIDE-ADENINE-DINUCLEOTIDE
C21 H27 N7 O14 P2
BAWFJGJZGIEFAR-NNYOXOHSSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CPR
Query on CPR

A, B 6-CHLOROPURINE RIBOSIDE, 5'-MONOPHOSPHATE
C10 H13 Cl N4 O7 P
ALOBOMYIOYNCBS-KQYNXXCUSA-O
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.274
  • R-Value Work: 0.229
  • Space Group: I 4
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 145.19 α = 90.00
b = 145.19 β = 90.00
c = 127.10 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-12-13
  • Released Date: 2004-01-27
  • Deposition author(s): Risal, D., Strickler, M.D., Goldstein, B.M.

Revision History

  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4