1M49

Crystal Structure of Human Interleukin-2 Complexed with SP-1985

Structural Biology Knowledgebase: 1M49 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.278
  • R-Value Work: 0.223

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1M49

Classification: CYTOKINE

Total Structure Weight: 31995.48

Macromolecule Entities
Molecule Chains Length Organism Details
interleukin-2 A, B 133 Homo sapiens Gene Name(s): IL2 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CMM
Query on CMM

A, B 2-[2-(1-CARBAMIMIDOYL-PIPERIDIN-3-YL)-ACETYLAMINO]- 3-{4-[2-(3-OXALYL-1H-INDOL-7-YL)ETHYL]-PHENYL}- PROPIONIC ACID METHYL ESTER
C30 H35 N5 O6
YRVAENMKEUHMEX-YKSBVNFPSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.278
  • R-Value Work: 0.223
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 51.32 α = 90.00
b = 58.38 β = 90.00
c = 93.51 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-07-02
  • Released Date: 2002-07-31
  • Deposition author(s): Arkin, M.A., Randal, M., DeLano, W.L., Hyde, J., Luong, T.N., Oslob, J.D., Raphael, D.R., Taylor, L., Wang, J., McDowell, R.S., Wells, J.A., Braisted, A.C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4