1KZ8
CRYSTAL STRUCTURE OF PORCINE FRUCTOSE-1,6-BISPHOSPHATASE COMPLEXED WITH A NOVEL ALLOSTERIC-SITE INHIBITOR
- PDB DOI: https://doi.org/10.2210/pdb1KZ8/pdb
- Classification: HYDROLASE
- Organism(s): Sus scrofa
- Expression System: Escherichia coli
- Mutation(s): No 
- Deposited: 2002-02-06 Released: 2002-10-16 
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.214 
- R-Value Work: 0.177 
- R-Value Observed: 0.179 
This is version 1.4 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
FRUCTOSE-1,6-BISPHOSPHATASE | A, B [auth F] | 337 | Sus scrofa | Mutation(s): 0  EC: 3.1.3.11 | |
UniProt | |||||
Find proteins for P00636 (Sus scrofa) Explore P00636  Go to UniProtKB:  P00636 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P00636 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
Ligands 4 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PFE Query on PFE | F [auth A], J [auth F] | {4-[3-(6,7-DIETHOXY-QUINAZOLIN-4-YLAMINO)-PHENYL]-THIAZOL-2-YL}-METHANOL C22 H22 N4 O3 S ZJESXGUODSBHSK-UHFFFAOYSA-N | |||
AMP Query on AMP | E [auth A], I [auth F] | ADENOSINE MONOPHOSPHATE C10 H14 N5 O7 P UDMBCSSLTHHNCD-KQYNXXCUSA-N | |||
F6P Query on F6P | C [auth A], G [auth F] | 6-O-phosphono-beta-D-fructofuranose C6 H13 O9 P BGWGXPAPYGQALX-ARQDHWQXSA-N | |||
MN Query on MN | D [auth A], H [auth F] | MANGANESE (II) ION Mn WAEMQWOKJMHJLA-UHFFFAOYSA-N |
Binding Affinity Annotations  | |||
---|---|---|---|
ID | Source | Binding Affinity | |
AMP | BindingDB:  1KZ8 | IC50: min: 140, max: 9800 (nM) from 10 assay(s) | |
PFE | BindingDB:  1KZ8 | IC50: min: 340, max: 1.00e+4 (nM) from 3 assay(s) | |
Binding MOAD:  1KZ8 | IC50: 830 (nM) from 1 assay(s) | ||
PDBBind:  1KZ8 | IC50: 830 (nM) from 1 assay(s) |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.214 
- R-Value Work: 0.177 
- R-Value Observed: 0.179 
- Space Group: P 21 21 2
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 59.65 | α = 90 |
b = 165.94 | β = 90 |
c = 79.223 | γ = 90 |
Software Name | Purpose |
---|---|
DENZO | data reduction |
SCALEPACK | data scaling |
CCP4 | model building |
REFMAC | refinement |
CCP4 | phasing |
Entry History 
Deposition Data
- Released Date: 2002-10-16  Deposition Author(s): Wright, S.W., Carlo, A.A., Carty, M.D., Danley, D.E., Hageman, D.L., Karam, G.A., Levy, C.B., Mansour, M.N., Mathiowetz, A.M., McClure, L.D., Nestor, N.B., McPherson, R.K., Pandit, J., Pustilnik, L.R., Schulte, G.K., Soeller, W.C., Treadway, J.L., Wang, I.-K., Bauer, P.H.
Revision History (Full details and data files)
- Version 1.0: 2002-10-16
Type: Initial release - Version 1.1: 2008-04-28
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Derived calculations, Version format compliance - Version 1.3: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Data collection, Derived calculations, Structure summary - Version 1.4: 2023-08-16
Changes: Data collection, Database references, Refinement description, Structure summary