1K7K

crystal structure of RdgB- inosine triphosphate pyrophosphatase from E. coli

Structural Biology Knowledgebase: 1K7K SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.238
  • R-Value Work: 0.211

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1K7K

Classification: STRUCTURAL GENOMICS UNKNOWN FUNCTION

Total Structure Weight: 23871.66

Macromolecule Entities
Molecule Chains Length Organism Details
Hypothetical protein yggV A 221 Escherichia coli EC#: 3.6.1.19 IUBMB 5.3.3.14 IUBMB
Mutation: M1M, M106M
Gene Name(s): rdgB yggV b2954 JW2921
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.238
  • R-Value Work: 0.211
  • Space Group: P 43 21 2

Unit Cell:

Length (Å) Angle (°)
a = 78.18 α = 90.00
b = 78.18 β = 90.00
c = 80.40 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-10-19
  • Released Date: 2002-08-14
  • Deposition author(s): Sanishvili, R., Joachimiak, A., Edwards, A., Savchenko, A., Skarina, T., Midwest Center for Structural Genomics (MCSG)

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4