1IA0

KIF1A HEAD-MICROTUBULE COMPLEX STRUCTURE IN ATP-FORM

Structural Biology Knowledgebase: 1IA0 SBKB.org


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 15.0 Å
  • Aggregation State: Filament
  • Specimen Type: Vitreous Ice (cryo Em)
  • Reconstruction Method: Helical

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1IA0

Classification: transport protein

Total Structure Weight: 146636.99

Macromolecule Entities
Molecule Chains Length Organism Details
TUBULIN ALPHA CHAIN A 451 Sus scrofa Gene Name(s): TUBA1A Gene View
TUBULIN BETA CHAIN B 445 Sus scrofa Gene Name(s):
KINESIN-LIKE PROTEIN KIF1A K 394 Mus musculus Fragment: MOTOR DOMAIN
Mutation: P202A
Gene Name(s): Kif1a Atsv Kif1

Small Molecules
Ligands 5 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TXL
Query on TXL

B TAXOTERE
C43 H53 N O14
ZDZOTLJHXYCWBA-VCVYQWHSSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GTP
Query on GTP

A GUANOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O14 P3
XKMLYUALXHKNFT-UUOKFMHZSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ACP
Query on ACP

K PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
ADENOSINE-5'-[BETA, GAMMA-METHYLENE]TRIPHOSPHATE (Synonym)
C11 H18 N5 O12 P3
UFZTZBNSLXELAL-IOSLPCCCSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GDP
Query on GDP

B GUANOSINE-5'-DIPHOSPHATE
C10 H15 N5 O11 P2
QGWNDRXFNXRZMB-UUOKFMHZSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

K MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 15.0 Å
  • Aggregation State: Filament
  • Specimen Type: Vitreous Ice (cryo Em)
  • Reconstruction Method: Helical

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-03-22
  • Released Date: 2002-03-22
  • Deposition author(s): Kikkawa, M., Sablin, E.P., Okada, Y., Yajima, H., Fletterick, R.J., Hirokawa, N.

Revision History

  • 2016-04-27
    Type: Other | Details: Refinement remark added
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4