1HCF

CRYSTAL STRUCTURE OF TRKB-D5 BOUND TO NEUROTROPHIN-4/5

Structural Biology Knowledgebase: 1HCF SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.264
  • R-Value Work: 0.218

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1HCF

Classification: TRANSFERASE / HORMONE

Total Structure Weight: 51365.88

Macromolecule Entities
Molecule Chains Length Organism Details
NEUROTROPHIN-4 A, B 130 Homo sapiens Fragment: ACTIVE, FRAGMENT. PRO-REGION CLEAVED
Gene Name(s): NTF4 Gene View NTF5
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
BDNF/NT-3 GROWTH FACTORS RECEPTOR X, Y 101 Homo sapiens EC#: 2.7.10.1 IUBMB
Fragment: EXTRACELLULAR DOMAIN 5 (RESIDUES 286 - 383)
Gene Name(s): NTRK2 Gene View TRKB
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.264
  • R-Value Work: 0.218
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 74.37 α = 90.00
b = 80.41 β = 90.00
c = 91.32 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-05-03
  • Released Date: 2001-12-06
  • Deposition author(s): Banfield, M.J., Naylor, R.L., Robertson, A.G.S., Allen, S.J., Dawbarn, D., Brady, R.L.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4