1GVF

STRUCTURE OF TAGATOSE-1,6-BISPHOSPHATE ALDOLASE

Structural Biology Knowledgebase: 1GVF SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Observed: 0.131

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1GVF

Classification: LYASE

Total Structure Weight: 64049.58

Macromolecule Entities
Molecule Chains Length Organism Details
TAGATOSE-BISPHOSPHATE ALDOLASE AGAY A, B 286 Escherichia coli EC#: 4.1.2.40 IUBMB
Gene Name(s): kbaY agaY kba yraC b3137 JW3106

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PGH
Query on PGH

A, B PHOSPHOGLYCOLOHYDROXAMIC ACID
C2 H6 N O6 P
BAXHHWZKQZIJID-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A, B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A, B 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NA
Query on NA

A, B SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Observed: 0.131
  • Space Group: I 2 2 2

Unit Cell:

Length (Å) Angle (°)
a = 72.65 α = 90.00
b = 100.46 β = 90.00
c = 206.66 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-02-11
  • Released Date: 2002-06-18
  • Deposition author(s): Hall, D.R., Hunter, W.N.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4