1GMX

Escherichia coli GlpE sulfurtransferase

Structural Biology Knowledgebase: 1GMX SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.1 Å
  • R-Value Free: 0.151
  • R-Value Work: 0.128

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1GMX

Classification: TRANSFERASE

Total Structure Weight: 12677.14

Macromolecule Entities
Molecule Chains Length Organism Details
THIOSULFATE SULFURTRANSFERASE GLPE A 108 Escherichia coli EC#: 2.8.1.1 IUBMB
Gene Name(s): glpE b3425 JW3388
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ACT
Query on ACT

A ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
CSS
Query on CSS
A L-PEPTIDE LINKING C3 H7 N O2 S2 CYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.1 Å
  • R-Value Free: 0.151
  • R-Value Work: 0.128
  • Space Group: P 32

Unit Cell:

Length (Å) Angle (°)
a = 53.87 α = 90.00
b = 53.87 β = 90.00
c = 30.52 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-09-25
  • Released Date: 2001-11-28
  • Deposition author(s): Spallarossa, A., Donahue, J.T., Larson, T.J., Bolognesi, M., Bordo, D.

Revision History

  • 2012-08-01
    Type: Version format compliance | Details: REMARK 4
  • 2012-08-01
    Type: Polymer description | Details: COMPND
  • 2012-08-01
    Type: Other | Details: ANISOU,REMARK 525
  • 2012-08-01
    Type: Binding sites and description | Details: SITE
  • 2012-08-01
    Type: Non-polymer description | Details: HETSYN,FORMUL
  • 2012-08-01
    Type: Geometry validation | Details: REMARK 500
  • 2012-08-01
    Type: Function and keywords | Details: KEYWDS
  • 2012-08-01
    Type: Sequence database correspondence | Details: DBREF
  • 2012-08-01
    Type: Atom nomenclature | Details: HETATM
  • 2012-08-01
    Type: Biological assembly | Details: REMARK 300,REMARK 350