1GEC

GLYCYL ENDOPEPTIDASE-COMPLEX WITH BENZYLOXYCARBONYL-LEUCINE-VALINE-GLYCINE-METHYLENE COVALENTLY BOUND TO CYSTEINE 25

Structural Biology Knowledgebase: 1GEC SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.258
  • R-Value Work: 0.196

Literature

Macromolecules
Sequence Display for 1GEC

Classification: HYDROLASE / HYDROLASE INHIBITOR

Total Structure Weight: 23808.30

Macromolecule Entities
Molecule Chains Length Organism Details
GLYCYL ENDOPEPTIDASE E 216 Carica papaya EC#: 3.4.22.25 IUBMB
Mutation: K58L
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
BENZYLOXYCARBONYL-LEUCINE-VALINE-GLYCINE-METHYLENE INHIBITOR I 5 synthetic

Small Molecules
Biologically Interesting Molecules 1 Unique
ID Chains Name Type/Class 2D Diagram 3D Interactions
PRD_000337
Query on PRD_000337
I BENZYLOXYCARBONYL-LEUCINE-VALINE-GLYCINE-METHYLENE Peptide-like /
Inhibitor
Ligand Explorer

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.258
  • R-Value Work: 0.196
  • Space Group: P 31

Unit Cell:

Length (Å) Angle (°)
a = 55.78 α = 90.00
b = 55.78 β = 90.00
c = 64.43 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1995-05-25
  • Released Date: 1995-12-07
  • Deposition author(s): Ohara, B.P., Hemmings, A.M., Buttle, D.J., Pearl, L.H.

Revision History

  • 2012-12-12
    Type: Other | Details: Add PRD info
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Atom nomenclature | Details: Atom nomenclature
  • 2011-07-13
    Type: Binding sites and description | Details: Binding sites and description
  • 2011-07-13
    Type: Non-polymer description | Details: Non-polymer description
  • 2011-07-13
    Type: Function and keywords | Details: Function and keywords
  • 2011-07-13
    Type: Linkage | Details: Linkage
  • 2011-07-13
    Type: Sequence database correspondence | Details: Sequence database correspondence
  • 2011-07-13
    Type: Polymer description | Details: Changed inhibitor presentation or chemistry