1FMD

THE STRUCTURE AND ANTIGENICITY OF A TYPE C FOOT-AND-MOUTH DISEASE VIRUS


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.50 Å
  • R-Value Work: 0.204 
  • R-Value Observed: 0.204 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

The structure and antigenicity of a type C foot-and-mouth disease virus.

Lea, S.Hernandez, J.Blakemore, W.Brocchi, E.Curry, S.Domingo, E.Fry, E.Abu-Ghazaleh, R.King, A.Newman, J.Stuart, D.Mateu, M.G.

(1994) Structure 2: 123-139

  • DOI: https://doi.org/10.1016/s0969-2126(00)00014-9
  • Primary Citation of Related Structures:  
    1FMD

  • PubMed Abstract: 

    Picornaviruses are responsible for a wide range of mammalian diseases and, in common with other RNA viruses, show considerable antigenic variation. Foot-and-mouth disease viruses (FMDVs) constitute one genus of the picornavirus family and are classified into seven serotypes, each of which shows considerable intratypic variation. This antigenic variation leads to continuing difficulties in controlling the disease. To date the structure of only one serotype, O, has been reported.


  • Organizational Affiliation

    Lab. of Molecular Biophysics, University of Oxford, UK.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
FOOT-AND-MOUTH DISEASE VIRUS (SUBUNIT VP1)A [auth 1]208Foot-and-mouth disease virusMutation(s): 0 
UniProt
Find proteins for Q65095 (Foot-and-mouth disease virus)
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Go to UniProtKB:  Q65095
Entity Groups  
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UniProt GroupQ65095
Sequence Annotations
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  • Reference Sequence
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
FOOT-AND-MOUTH DISEASE VIRUS (SUBUNIT VP2)B [auth 2]218Foot-and-mouth disease virusMutation(s): 0 
UniProt
Find proteins for P15072 (Foot-and-mouth disease virus (isolate -/Germany/C1Oberbayen/1960 serotype C))
Explore P15072 
Go to UniProtKB:  P15072
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UniProt GroupP15072
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  • Reference Sequence
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
FOOT-AND-MOUTH DISEASE VIRUS (SUBUNIT VP3)C [auth 3]219Foot-and-mouth disease virusMutation(s): 0 
UniProt
Find proteins for P15072 (Foot-and-mouth disease virus (isolate -/Germany/C1Oberbayen/1960 serotype C))
Explore P15072 
Go to UniProtKB:  P15072
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UniProt GroupP15072
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  • Reference Sequence
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
FOOT-AND-MOUTH DISEASE VIRUS (SUBUNIT VP4)D [auth 4]85Foot-and-mouth disease virusMutation(s): 0 
UniProt
Find proteins for P49303 (Foot-and-mouth disease virus (isolate -/Azerbaijan/A22-550/1965 serotype A))
Explore P49303 
Go to UniProtKB:  P49303
Entity Groups  
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UniProt GroupP49303
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.50 Å
  • R-Value Work: 0.204 
  • R-Value Observed: 0.204 
  • Space Group: I 2 3
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 347.6α = 90
b = 347.6β = 90
c = 347.6γ = 90
Software Package:
Software NamePurpose
X-PLORmodel building
X-PLORrefinement
X-PLORphasing

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 1994-08-31
    Type: Initial release
  • Version 1.1: 2008-03-24
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2024-02-07
    Changes: Data collection, Database references, Derived calculations, Other