1DQL

CRYSTAL STRUCTURE OF AN UNLIGANDED (NATIVE) FV FROM A HUMAN IGM ANTI-PEPTIDE ANTIBODY

Structural Biology Knowledgebase: 1DQL SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.261
  • R-Value Work: 0.181

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1DQL

Classification: IMMUNE SYSTEM

Total Structure Weight: 24742.50

Macromolecule Entities
Molecule Chains Length Organism Details
IGM MEZ IMMUNOGLOBULIN L 106 Homo sapiens Fragment: LIGHT CHAIN VARIABLE DOMAIN FRAGMENT
IGM MEZ IMMUNOGLOBULIN H 123 Homo sapiens Fragment: HEAVY CHAIN VARIABLE DOMAIN FRAGMENT

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
PCA
Query on PCA
H L-PEPTIDE LINKING C5 H7 N O3 GLU

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.261
  • R-Value Work: 0.181
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 53.57 α = 90.00
b = 61.13 β = 96.90
c = 42.20 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-01-04
  • Released Date: 2000-10-04
  • Deposition author(s): Ramsland, P.A., Shan, L., Moomaw, C.R., Slaughter, C.A., Guddat, L.W., Edmundson, A.B.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4