1CJT

COMPLEX OF GS-ALPHA WITH THE CATALYTIC DOMAINS OF MAMMALIAN ADENYLYL CYCLASE: COMPLEX WITH BETA-L-2',3'-DIDEOXYATP, MN, AND MG

Structural Biology Knowledgebase: 1CJT SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.206

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1CJT

Classification: LYASE / LYASE / SIGNALING PROTEIN

Total Structure Weight: 96628.77

Macromolecule Entities
Molecule Chains Length Organism Details
ADENYLATE CYCLASE, TYPE V A 217 Canis lupus EC#: 4.6.1.1 IUBMB
Fragment: C1A DOMAIN OF ADENYLYL CYCLASE
Mutation: V476M
Gene Name(s): ADCY5 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
ADENYLATE CYCLASE, TYPE II B 212 Rattus norvegicus EC#: 4.6.1.1 IUBMB
Fragment: C2A DOMAIN OF ADENYLYL CYCLASE
Gene Name(s): Adcy2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) C 402 Bos taurus Fragment: TRYPSINIZED FRAGMENT
Gene Name(s): GNAS Gene View GNAS1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 7 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GSP
Query on GSP

C 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE
C10 H16 N5 O13 P3 S
XOFLBQFBSOEHOG-UUOKFMHZSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
DAD
Query on DAD

A 2',3'-DIDEOXYADENOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O11 P3
OAKPWEUQDVLTCN-RQJHMYQMSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
FOK
Query on FOK

A FORSKOLIN
C22 H34 O7
OHCQJHSOBUTRHG-KGGHGJDLSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MES
Query on MES

A 2-(N-MORPHOLINO)-ETHANESULFONIC ACID
C6 H13 N O4 S
SXGZJKUKBWWHRA-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MN
Query on MN

A MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

C CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, C MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.206
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 118.20 α = 90.00
b = 134.20 β = 90.00
c = 71.30 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-04-16
  • Released Date: 1999-08-31
  • Deposition author(s): Tesmer, J.J.G., Sprang, S.R.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4