1BD0

ALANINE RACEMASE COMPLEXED WITH ALANINE PHOSPHONATE

Structural Biology Knowledgebase: 1BD0 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.266
  • R-Value Work: 0.240

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1BD0

Classification: ISOMERASE

Total Structure Weight: 87845.23

Macromolecule Entities
Molecule Chains Length Organism Details
ALANINE RACEMASE A, B 388 Geobacillus stearothermophilus EC#: 5.1.1.1 IUBMB
Mutation: R383A
Gene Name(s): alr dal
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
IN5
Query on IN5

A, B {1-[(3-HYDROXY-METHYL-5-PHOSPHONOOXY-METHYL- PYRIDIN-4-YLMETHYL)-AMINO]-ETHYL}-PHOSPHONIC ACID
C10 H18 N2 O8 P2
WHDCJKAOZPBUAY-SSDOTTSWSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.266
  • R-Value Work: 0.240
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 98.23 α = 90.00
b = 87.69 β = 90.00
c = 85.31 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-05-12
  • Released Date: 1998-10-14
  • Deposition author(s): Stamper, G.F., Morollo, A.A., Ringe, D.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4