1ZF3

ATC Four-stranded DNA Holliday Junction

Structural Biology Knowledgebase: 1ZF3 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.84 Å
  • R-Value Free: 0.231
  • R-Value Work: 0.202

Literature

Macromolecules
Sequence Display for 1ZF3

Classification: DNA

Total Structure Weight: 6130.14

Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*CP*CP*GP*AP*TP*AP*TP*CP*GP*G)-3' A, B 10 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CA
Query on CA

B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.84 Å
  • R-Value Free: 0.231
  • R-Value Work: 0.202
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 64.95 α = 90.00
b = 24.62 β = 112.09
c = 37.46 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2005-04-19
  • Released Date: 2005-05-10
  • Deposition author(s): Hays, F.A., Teegarden, A.T., Jones, Z.J.R., Harms, M., Raup, D., Watson, J., Cavaliere, E., Ho, P.S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor