1Z6P

Glycogen phosphorylase AMP site inhibitor complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.260
  • R-Value Work: 0.200

Literature

Macromolecules
Sequence Display for 1Z6P

Classification: TRANSFERASE

Total Structure Weight: 97941.66

Macromolecule Entities
Molecule Chains Length Organism Details
Glycogen phosphorylase, muscle form A 842 Oryctolagus cuniculus EC#: 2.4.1.1 IUBMB
Fragment: Glycogen Phosphorylase
Mutation: L380I, K680X
Gene Name(s): PYGM Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
194
Query on 194

A 4-{2-[(3-NITROBENZOYL)AMINO]PHENOXY}PHTHALIC ACID
C21 H14 N2 O8
NAQUAVBNIYTIIS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
194 IC50: 900 nM (97) BindingDB

IC50: 900 nM  BindingMOAD
IC50: 900 nM  PDBbind
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
LLP
Query on LLP
A L-PEPTIDE LINKING C14 H22 N3 O7 P LYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.260
  • R-Value Work: 0.200
  • Space Group: P 43 21 2

Unit Cell:

Length (Å) Angle (°)
a = 127.47 α = 90.00
b = 127.47 β = 90.00
c = 115.80 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-03-23
  • Released Date: 2005-04-12
  • Deposition author(s): Kristiansen, M., Andersen, B., Iversen, L.F., Westergaard, N.

Revision History

  • Version 1_0: 2005-04-12

    Type: Initial release

  • Version 1_1: 2008-04-30

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Derived calculations, Version format compliance