NMR Ensemble

1XAV

Major G-quadruplex structure formed in human c-MYC promoter, a monomeric parallel-stranded quadruplex

Structural Biology Knowledgebase: 1XAV SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 200
  • Conformers Submitted: 20
  • Selection Criteria: Structures with the Least Restraint Violations

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1XAV

Classification: DNA

Total Structure Weight: 7086.76

Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*TP*GP*AP*GP*GP*GP*TP*GP*GP*GP*TP*AP*GP*GP*GP*TP*GP*GP*GP*TP*AP*A)-3' A 22 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
K
Query on K

A POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 200
  • Conformers Submitted: 20
  • Selection Criteria: structures with the least restraint violations

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2004-08-26
  • Released Date: 2005-02-01
  • Deposition author(s): Ambrus, A., Chen, D., Dai, J., Jones, R.A., Yang, D.

Revision History

  • 2014-09-17
    Type: Entry title | Details: updated entry title
  • 2014-09-17
    Type: Other | Details: updated related entries list
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4