1VJO

Crystal structure of Alanine--glyoxylate aminotransferase (ALR1004) from Nostoc sp. at 1.70 A resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.202
  • R-Value Work: 0.151

Literature

Macromolecules
Sequence Display for 1VJO

Classification: TRANSFERASE

Total Structure Weight: 43996.86

Macromolecule Entities
Molecule Chains Length Organism Details
alanine--glyoxylate aminotransferase A 393 Nostoc sp. pcc 7120 EC#: 2.6.1.44 IUBMB
Mutation: M1M, M41M, M57M, M86M, M115M, M222M, M244M, M360M
Gene Name(s): alr1004
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PLP
Query on PLP

A PYRIDOXAL-5'-PHOSPHATE
VITAMIN B6 Phosphate (Synonym)
C8 H10 N O6 P
NGVDGCNFYWLIFO-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 79.26 α = 90.00
b = 101.06 β = 90.00
c = 97.25 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-03-16
  • Released Date: 2004-03-23
  • Deposition author(s): Joint Center for Structural Genomics (JCSG)

Revision History

  • 2008-04-26
    Type: Version format compliance
  • 2011-07-13
    Type: Advisory, Derived calculations, Source and taxonomy, Version format compliance