Biphenyl dioxygenase (BphA1A2) derived from Rhodococcus sp. strain RHA1
1ULI
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Oxidoreductase
    Structure Weight: 221835.83
    Molecule: biphenyl dioxygenase large subunit
    Polymer: 1 Type: protein Length: 460
    Chains: A, C, E
    EC#: 1.14.12.18   
    Organism: Rhodococcus jostii RHA1
    Gene Names: bphA1 bphAa RHA1_ro08060
    UniProtKB: Protein Feature View | Search PDB | Q53122  
    Molecule: biphenyl dioxygenase small subunit
    Polymer: 2 Type: protein Length: 187
    Chains: B, D, F
    EC#: 1.14.12.18   
    Organism: Rhodococcus jostii RHA1
    Gene Names: bphA2 bphAb RHA1_ro08059
    UniProtKB: Protein Feature View | Search PDB | Q53123  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Rhodococcus sp.   Taxonomy   Expression System: Rhodococcus erythropolis  
    Polymer: 2
    Scientific Name: Rhodococcus sp.   Taxonomy   Expression System: Rhodococcus erythropolis  
     
  •   Related PDB Entries Hide
    Identifier Details
    1ULJ   the same protein complexed with BPH 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    FE2
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    FE2 Fe
    FE (II) ION
    FES
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    FES Fe2 S2
    FE2/S2 (INORGANIC) CLUSTER
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Furusawa, Y.,  Nagarajan, V.,  Masai, E.,  Tanokura, M.,  Fukuda, M.,  Senda, T.

    Deposition:   2003-09-12
    Release:   2004-09-28
    Last Modified (REVDAT):   2011-07-13
     
  •   Revision History    Hide
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    2011-07-13
    Source and taxonomy
    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.20
    R-Value: 0.169 (obs.)
    R-Free: 0.201
    Space Group: P 43 21 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 137.74 α = 90.00 
    b = 137.74 β = 90.00 
    c = 237.74 γ = 90.00