1T0D

Crystal Structure of 2-aminopurine labelled bacterial decoding site RNA

Structural Biology Knowledgebase: 1T0D SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.266
  • R-Value Work: 0.205

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1T0D

Classification: RNA

Total Structure Weight: 21140.97

Macromolecule Entities
Molecule Chains Length Organism Details
5'-R(*GP*GP*UP*GP*GP*UP*GP*(MTU)P*AP*GP*UP*CP*GP*CP*UP*GP*G)-3' A, C 17 synthetic
5'-R(*CP*AP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*AP*CP*CP*C)-3' B, D 16 synthetic

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MTU
Query on MTU
A, C RNA LINKING C10 H14 N5 O7 P A

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.266
  • R-Value Work: 0.205
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 31.64 α = 90.00
b = 87.32 β = 93.27
c = 32.79 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2004-04-08
  • Released Date: 2004-06-15
  • Deposition author(s): Shandrick, S., Zhao, Q., Han, Q., Ayida, B.K., Takahashi, M., Winters, G.C., Simonsen, K.B., Vourloumis, D., Hermann, T.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4