1SM5

Crystal Structure of a DNA Decamer Containing a Thymine-dimer

Structural Biology Knowledgebase: 1SM5 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.198

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1SM5

Classification: DNA

Total Structure Weight: 12435.64

Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*GP*CP*(BRU)P*TP*AP*AP*TP*(BRU)P*CP*G)-3' A, C 10 synthetic
5'-D(*CP*GP*AP*AP*TP*TP*AP*AP*GP*C)-3' B, D 10 synthetic

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
BRU
Query on BRU
A, C DNA LINKING C9 H12 Br N2 O8 P DU

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.198
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 24.50 α = 90.00
b = 53.85 β = 90.00
c = 75.33 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2004-03-08
  • Released Date: 2004-05-25
  • Deposition author(s): Park, H., Zhang, K., Ren, Y., Nadji, S., Sinha, N., Taylor, J.-S., Kang, C.
  • Previous versions: 1MV7

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4