1RQJ

Active Conformation of Farnesyl Pyrophosphate Synthase Bound to Isopentyl Pyrophosphate and Risedronate


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.239
  • R-Value Work: 0.206

Literature

Macromolecules
Sequence Display for 1RQJ

Classification: TRANSFERASE

Total Structure Weight: 65599.47

Macromolecule Entities
Molecule Chains Length Organism Details
Geranyltranstransferase A, B 299 Escherichia coli EC#: 2.5.1.10 IUBMB
Gene Name(s): ispA b0421 JW0411
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
RIS
Query on RIS

A, B 1-HYDROXY-2-(3-PYRIDINYL)ETHYLIDENE BIS-PHOSPHONIC ACID
Risedronate (Synonym)
C7 H11 N O7 P2
IIDJRNMFWXDHID-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
IPE
Query on IPE

A, B 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE
ISOPENTENYL PYROPHOSPHATE (Synonym)
C5 H12 O7 P2
NUHSROFQTUXZQQ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.239
  • R-Value Work: 0.206
  • Space Group: P 41 2 2

Unit Cell:

Length (Å) Angle (°)
a = 88.80 α = 90.00
b = 88.80 β = 90.00
c = 174.99 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-12-05
  • Released Date: 2004-03-02
  • Deposition author(s): Hosfield, D.J., Zhang, Y., Dougan, D.R., Brooun, A., Tari, L.W., Swanson, R.V., Finn, J.

Revision History

  • Version 1_0: 2004-03-02

    Type: Initial release

  • Version 1_1: 2008-04-29

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Derived calculations, Version format compliance

  • Version 1_3: 2013-05-22

    Type: Non-polymer description

  • Version 1_4: 2017-10-04

    Type: Advisory, Refinement description, Structure summary