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B-DNA Dodecamer CGTGAATTCACG complexed with minor groove binder methylproamine
 
 
DOI:10.2210/pdb1qv4/pdb   NDB ID: DD0059
1QV4
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: DNA
    Structure Weight: 7792.44
     
    Molecule:5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'
    Polymer:1Type:polydeoxyribonucleotideLength:12
    Chains:A, B
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
     
     
  •  
    Move Section Related PDB Entries Hide
    Id Details
    1QV8  B-DNA Dodecamer d(CGCGAATTCGCG)2 complexed with proamine 
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    MBB     2'-(3-METHYL-4-DIMETHYLAMINOPHENYL)-5-(4- METHYL-1-PIPERAZINYL)-2,5'-BI
    -BENZIMIDAZOLE
    C28 H31 N7 3DLigand Explorer Link out to Ligand Expos:MBB Link out to SuperLigands:MBB Link out to SuperHapten:MBB
     
     
 
 
  •  
    Move Section Deposition Summary Hide
    Authors:   Squire, C.J.,   Clark, G.R.

    Deposition:   2003-08-26
    Release:   2004-09-07
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   Download Structure Factors
    View a histogram of Resolution Resolution[Å]: 2.50
    R-Value: 0.220 (obs.)
    R-Free: 0.247
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 25.44 α = 90.00 
    b = 40.64 β = 90.00 
    c = 66.35 γ = 90.00