1QDE

CRYSTAL STRUCTURE OF THE ATPASE DOMAIN OF TRANSLATION INITIATION FACTOR 4A FROM SACCHAROMYCES CEREVISIAE-THE PROTOTYPE OF THE DEAD BOX PROTEIN FAMILY


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.266
  • R-Value Work: 0.214

Literature

Macromolecules
Sequence Display for 1QDE

Classification: GENE REGULATION

Total Structure Weight: 25262.21

Macromolecule Entities
Molecule Chains Length Organism Details
TRANSLATION INITIATION FACTOR 4A A 224 Saccharomyces cerevisiae EC#: 3.6.4.13 IUBMB
Fragment: N-TERMINAL DOMAIN, RESIDUES 9-232
Gene Name(s): TIF1 TIF41A YKR059W TIF2 TIF41B YJL138C J0660
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.266
  • R-Value Work: 0.214
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 38.88 α = 90.00
b = 59.28 β = 90.00
c = 92.05 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-05-20
  • Released Date: 2000-05-23
  • Deposition author(s): Benz, J., Trachsel, H., Baumann, U.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4