1Q19

Carbapenam Synthetase

Structural Biology Knowledgebase: 1Q19 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.220

Literature

Macromolecules
Sequence Display for 1Q19

Classification: BIOSYNTHETIC PROTEIN

Total Structure Weight: 227029.28

Macromolecule Entities
Molecule Chains Length Organism Details
CarA A, B, C, D 503 Pectobacterium carotovorum EC#: 6.3.3.6 IUBMB
Gene Name(s): carA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
APC
Query on APC

A, B, C, D DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER
ALPHA,BETA-METHYLENEADENOSINE-5'-TRIPHOSPHATE (Synonym)
C11 H18 N5 O12 P3
CAWZRIXWFRFUQB-IOSLPCCCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SSC
Query on SSC

A, B, C, D (2S,5S)-5-CARBOXYMETHYLPROLINE
C7 H11 N O4
LIZWYFXJOOUDNV-WHFBIAKZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B, C, D MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.220
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 103.04 α = 90.00
b = 61.95 β = 97.01
c = 175.87 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-07-18
  • Released Date: 2003-11-04
  • Deposition author(s): Miller, M.T., Gerratana, B., Stapon, A., Townsend, C.A., Rosenzweig, A.C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4