1PZ5

Structural basis of peptide-carbohydrate mimicry in an antibody combining site

Structural Biology Knowledgebase: 1PZ5 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.219

Literature

Macromolecules
Sequence Display for 1PZ5

Classification: IMMUNE SYSTEM

Total Structure Weight: 48257.18

Macromolecule Entities
Molecule Chains Length Organism Details
Light chain of Fab (SYA/J6) A 215 Mus musculus Gene Name(s): Igkc Igk-C
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Heavy chain of Fab (SYA/J6) B 220 Mus musculus Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Octapeptide (MDWNMHAA) C 8 synthetic


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.219
  • Space Group: P 43 21 2

Unit Cell:

Length (Å) Angle (°)
a = 69.31 α = 90.00
b = 69.31 β = 90.00
c = 198.56 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-07-09
  • Released Date: 2003-11-18
  • Deposition author(s): Vyas, N.K., Vyas, M.N., Chervenak, M.C., Bundle, D.R., Pinto, B.M., Quiocho, F.A.

Revision History

  • 2011-11-16
    Type: Atom occupancy | Details: Atom occupancy
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4