1PFP

CATHELIN-LIKE MOTIF OF PROTEGRIN-3

Structural Biology Knowledgebase: 1PFP SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.284
  • R-Value Work: 0.219

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1PFP

Classification: ANTIMICROBIAL PROTEIN

Total Structure Weight: 11970.81

Macromolecule Entities
Molecule Chains Length Organism Details
Protegrin 3 A 105 Sus scrofa Mutation: C85U, C96U, C107U, C124U
Gene Name(s): NPG3

Small Molecules
Modified Residues 2 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET
SEC
Query on SEC
L-PEPTIDE LINKING C3 H7 N O2 Se --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.284
  • R-Value Work: 0.219
  • Space Group: P 65 2 2

Unit Cell:

Length (Å) Angle (°)
a = 51.54 α = 90.00
b = 51.54 β = 90.00
c = 134.51 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-05-27
  • Released Date: 2003-11-11
  • Deposition author(s): Strub, M.-P., Hoh, F., Sanchez, J.-F., Strub, J.M., Bock, A., Aumelas, A., Dumas, C.

Revision History

  • 2014-08-06
    Type: Polymer description | Details: Change SEC to U
  • 2014-08-06
    Type: Linkage | Details: Remove links to SEC
  • 2014-02-19
    Type: Atom nomenclature | Details: Change CSE to SEC
  • 2014-02-19
    Type: Polymer description | Details: Change CSE to SEC
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4