1P3H

Crystal Structure of the Mycobacterium tuberculosis chaperonin 10 tetradecamer

Structural Biology Knowledgebase: 1P3H SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.280
  • R-Value Work: 0.259

Literature

Macromolecules
Sequence Display for 1P3H

Classification: CHAPERONE

Total Structure Weight: 151758.42

Macromolecule Entities
Molecule Chains Length Organism Details
10 kDa chaperonin A, B, C..., D, E, F, G, H, I, J, K, L, M, NA, B, C, D, E, F, G, H, I, J, K, L, M, N 99 Mycobacterium tuberculosis Gene Name(s): groS cpn10 groES mopB Rv3418c MTCY78.11
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MPD
Query on MPD

A, B, C, D, E, F, G, H, I, J, K, L, M, N (4S)-2-METHYL-2,4-PENTANEDIOL
C6 H14 O2
SVTBMSDMJJWYQN-YFKPBYRVSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.280
  • R-Value Work: 0.259
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 76.46 α = 90.00
b = 87.93 β = 106.78
c = 124.39 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-04-17
  • Released Date: 2003-07-15
  • Deposition author(s): Roberts, M.M., Coker, A.R., Fossati, G., Mascagni, P., Coates, A.R.M., Wood, S.P., TB Structural Genomics Consortium (TBSGC)
  • Previous versions: 1JH2

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4