NMR Ensemble

1OLN

Model for thiostrepton antibiotic binding to L11 substrate from 50S ribosomal RNA

Structural Biology Knowledgebase: 1OLN SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR, THEORETICAL MODEL
  • Conformers Calculated: --
  • Conformers Submitted: 1
  • Selection Criteria: Least Restraint Violation and Best Overall Docking Score

wwPDB Validation report is not available for this NMR entry.


Literature

Macromolecules
Sequence Display for 1OLN

Classification: RIBOSOME / ANTIBIOTIC

Total Structure Weight: 35480.18


Macromolecule Entities
Molecule Chains Length Organism Details
50S RIBOSOMAL PROTEIN L11 A 140 Thermotoga maritima Gene Name(s): rplK TM_0454
THIOSTREPTON B 19 Streptomyces azureus Gene Name(s): tpdA
Macromolecule Entities
Molecule Chains Length Organism Details
RNA C 58 Thermotoga maritima

Small Molecules
Biologically Interesting Molecules 1 Unique
ID Chains Name Type/Class 2D Diagram 3D Interactions
PRD_000223 (MH6,THR,NH2,DBU,SER,QUA,ALA,BB9,TS9,ILE,DCY,DHA) B THIOSTREPTON Thiopeptide /
Antibiotic
Ligand Explorer

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR, THEORETICAL MODEL
  • Conformers Calculated: --
  • Conformers Submitted: 1
  • Selection Criteria: LEAST RESTRAINT VIOLATION AND BEST OVERALL DOCKING SCORE

Structure Validation

Validation report is not available for this NMR entry.



Entry History

Deposition Data

  • Deposited Date: 2003-08-08
  • Released Date: 2003-09-11
  • Deposition author(s): Lentzen, G., Klinck, R., Matassova, N., Aboul-Ela, F., Murchie, A.I.H.

Revision History

  • 2012-12-12
    Type: Other | Details: Add PRD info
  • 2011-07-13
    Type: Version format compliance | Details: Compliance with PDBx exchange dictionary V4
  • 2011-07-13
    Type: Linkage | Details: Linkage
  • 2011-07-13
    Type: Sequence database correspondence | Details: Sequence database correspondence
  • 2011-07-13
    Type: Function and keywords | Details: Function and keywords
  • 2011-07-13
    Type: Atom nomenclature | Details: Atom nomenclature
  • 2011-07-13
    Type: Binding sites and description | Details: Binding sites and description
  • 2011-07-13
    Type: Polymer description | Details: Changed inhibitor presentation or chemistry