Crystal structure of the dengue 2 virus envelope glycoprotein in the postfusion conformation
1OK8
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Viral Protein
    Structure Weight: 44076.46
    Molecule: MAJOR ENVELOPE PROTEIN E
    Polymer: 1 Type: protein Length: 394
    Chains: A
    Fragment: SOLUBLE ECTODOMAIN, RESIDUES 281-674
    Organism: Dengue virus 2
    UniProtKB: Protein Feature View | Search PDB | P12823  
     
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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Dengue virus type 2   Taxonomy   Expression System: Drosophila melanogaster  
     
  •   Related PDB Entries Hide
    Identifier Details
    1L9K   DENGUE METHYLTRANSFERASE 
    1OAM   CRYSTAL STRUCTURE OF THE DENGUE 2 VIRUS ENVELOPE PROTEIN IN COMPLEX WITH N-OCTYL- BETA-D-GLUCOSIDE 
    1OAN   CRYSTAL STRUCTURE OF THE DENGUE 2 VIRUS ENVELOPE PROTEIN 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    CL
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    CL Cl
    CHLORIDE ION
    NAG
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    NAG C8 H15 N O6
    N-ACETYL-D-GLUCOSAMINE
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Modis, Y.,  Harrison, S.C.

    Deposition:   2003-07-19
    Release:   2004-01-29
    Last Modified (REVDAT):   2012-01-25
     
  •   Revision History    Hide
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    2012-01-25
    Refinement description
    2012-01-25
    Non-polymer description
    2012-01-25
    Geometry validation
    2012-01-25
    Version format compliance
    2012-01-25
    Function and keywords
    2012-01-25
    Other
    2012-01-25
    Biological assembly
    2012-01-25
    Binding sites and description
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.00
    R-Value: 0.222 (obs.)
    R-Free: 0.267
    Space Group: P 3 2 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 76.15 α = 90.00 
    b = 76.15 β = 90.00 
    c = 130.77 γ = 120.00