1OIV

X-ray structure of the small G protein Rab11a in complex with GDP


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.98 Å
  • R-Value Free: 0.246
  • R-Value Work: 0.210

Literature

Macromolecules
Sequence Display for 1OIV

Classification: PROTEIN TRANSPORT

Total Structure Weight: 44124.99

Macromolecule Entities
Molecule Chains Length Organism Details
RAS-RELATED PROTEIN RAB-11A A, B 191 Homo sapiens Fragment: RESIDUES 1-173
Details: DELETION MUTANT LACKING THE 43 C-TERMINAL RESIDUES
Gene Name(s): RAB11A Gene View RAB11
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GDP
Query on GDP

A, B GUANOSINE-5'-DIPHOSPHATE
C10 H15 N5 O11 P2
QGWNDRXFNXRZMB-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

B 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.98 Å
  • R-Value Free: 0.246
  • R-Value Work: 0.210
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 47.35 α = 90.00
b = 69.70 β = 90.00
c = 108.28 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-06-26
  • Released Date: 2004-01-08
  • Deposition author(s): Pasqualato, S., Senic-Matuglia, F., Renault, L., Goud, B., Salamero, J., Cherfils, J.

Revision History

  • 2011-05-08
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance