1OIM

Family 1 b-glucosidase from Thermotoga maritima


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.189

Literature

Macromolecules
Sequence Display for 1OIM

Classification: HYDROLASE

Total Structure Weight: 108207.64

Macromolecule Entities
Molecule Chains Length Organism Details
BETA-GLUCOSIDASE A A, B 468 Thermotoga maritima EC#: 3.2.1.21 IUBMB
Gene Name(s): bglA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NOJ
Query on NOJ

A, B 1-DEOXYNOJIRIMYCIN
MORANOLINE (Synonym)
C6 H13 N O4
LXBIFEVIBLOUGU-JGWLITMVSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
NOJ N/A in BindingDB
Kd: 4762 nM  BindingMOAD
Kd: 4800 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.189
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 94.69 α = 90.00
b = 94.47 β = 90.00
c = 113.82 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-06-19
  • Released Date: 2003-11-25
  • Deposition author(s): Gloster, T., Zechel, D.L., Boraston, A.B., Boraston, C.M., Macdonald, J.M., Tilbrook, D.M., Stick, R.V., Davies, G.J.

Revision History

  • 2011-05-08
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance